Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CHGBP05060 AC012317.2-201ENST00000623305 2251 ntBASIC21.61■■□□□ 1.05
CHGBP05060 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CHGBP05060 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.61■■□□□ 1.05
CHGBP05060 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 AC138894.3-201ENST00000603787 634 ntBASIC21.61■■□□□ 1.05
CHGBP05060 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.61■■□□□ 1.05
CHGBP05060 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.61■■□□□ 1.05
CHGBP05060 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.61■■□□□ 1.05
CHGBP05060 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.61■■□□□ 1.05
CHGBP05060 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHGBP05060 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGBP05060 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.6■■□□□ 1.05
CHGBP05060 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHGBP05060 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.6■■□□□ 1.05
CHGBP05060 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGBP05060 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGBP05060 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.6■■□□□ 1.05
CHGBP05060 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.6■■□□□ 1.05
CHGBP05060 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGBP05060 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.6■■□□□ 1.05
CHGBP05060 AC011840.4-201ENST00000578471 627 ntBASIC21.6■■□□□ 1.05
CHGBP05060 MIR3652-201ENST00000579335 131 ntBASIC21.6■■□□□ 1.05
CHGBP05060 AC099336.1-202ENST00000602961 463 ntBASIC21.6■■□□□ 1.05
CHGBP05060 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGBP05060 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGBP05060 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGBP05060 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHGBP05060 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHGBP05060 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CHGBP05060 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.59■■□□□ 1.05
CHGBP05060 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.59■■□□□ 1.05
CHGBP05060 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.59■■□□□ 1.05
CHGBP05060 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.59■■□□□ 1.05
CHGBP05060 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGBP05060 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.59■■□□□ 1.05
CHGBP05060 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGBP05060 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CHGBP05060 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.58■■□□□ 1.05
CHGBP05060 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHGBP05060 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.58■■□□□ 1.05
CHGBP05060 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.58■■□□□ 1.05
CHGBP05060 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CHGBP05060 AC125634.1-201ENST00000438758 1403 ntBASIC21.58■■□□□ 1.05
CHGBP05060 AC009949.1-201ENST00000623048 1830 ntBASIC21.58■■□□□ 1.05
CHGBP05060 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CHGBP05060 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 AC012615.1-201ENST00000565797 1299 ntBASIC21.58■■□□□ 1.05
CHGBP05060 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 AL121894.2-201ENST00000602977 491 ntBASIC21.58■■□□□ 1.05
CHGBP05060 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.58■■□□□ 1.05
CHGBP05060 AL138831.2-201ENST00000606564 490 ntBASIC21.58■■□□□ 1.05
CHGBP05060 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.58■■□□□ 1.05
CHGBP05060 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHGBP05060 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms