Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 CYP2D8P-201ENST00000433633 1490 ntBASIC18.66■□□□□ 0.58
IFNB1P01574 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
IFNB1P01574 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.66■□□□□ 0.58
IFNB1P01574 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
IFNB1P01574 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
IFNB1P01574 EGLN1P1-201ENST00000531623 762 ntBASIC18.66■□□□□ 0.58
IFNB1P01574 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.66■□□□□ 0.58
IFNB1P01574 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IFNB1P01574 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.66■□□□□ 0.58
IFNB1P01574 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IFNB1P01574 AC012313.1-201ENST00000593393 3059 ntBASIC18.66■□□□□ 0.58
IFNB1P01574 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IFNB1P01574 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFNB1P01574 KRT8P9-201ENST00000558927 1449 ntBASIC18.66■□□□□ 0.58
IFNB1P01574 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IFNB1P01574 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
IFNB1P01574 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
IFNB1P01574 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 AC128688.1-201ENST00000487626 519 ntBASIC18.65■□□□□ 0.58
IFNB1P01574 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.65■□□□□ 0.58
IFNB1P01574 AC024243.1-201ENST00000609234 778 ntBASIC18.65■□□□□ 0.58
IFNB1P01574 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
IFNB1P01574 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.65■□□□□ 0.58
IFNB1P01574 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFNB1P01574 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.65■□□□□ 0.58
IFNB1P01574 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
IFNB1P01574 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.58
IFNB1P01574 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFNB1P01574 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFNB1P01574 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFNB1P01574 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFNB1P01574 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFNB1P01574 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.64■□□□□ 0.58
IFNB1P01574 AC006116.8-202ENST00000587620 1550 ntBASIC18.64■□□□□ 0.58
IFNB1P01574 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
IFNB1P01574 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.64■□□□□ 0.57
IFNB1P01574 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.64■□□□□ 0.57
IFNB1P01574 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 AC009947.2-201ENST00000444014 672 ntBASIC18.64■□□□□ 0.57
IFNB1P01574 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
IFNB1P01574 NAPSB-206ENST00000562112 1266 ntBASIC18.64■□□□□ 0.57
IFNB1P01574 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.64■□□□□ 0.57
IFNB1P01574 MIR4497-201ENST00000583208 89 ntBASIC18.64■□□□□ 0.57
IFNB1P01574 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IFNB1P01574 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFNB1P01574 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.64■□□□□ 0.57
IFNB1P01574 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.63■□□□□ 0.57
IFNB1P01574 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
IFNB1P01574 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFNB1P01574 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms