Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.36■□□□□ 0.69
TIMP1P01033 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.36■□□□□ 0.69
TIMP1P01033 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.36■□□□□ 0.69
TIMP1P01033 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 AC096734.2-201ENST00000562054 433 ntBASIC19.36■□□□□ 0.69
TIMP1P01033 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TIMP1P01033 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.36■□□□□ 0.69
TIMP1P01033 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TIMP1P01033 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.36■□□□□ 0.69
TIMP1P01033 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMP1P01033 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.35■□□□□ 0.69
TIMP1P01033 BCAR1-209ENST00000546196 1340 ntBASIC19.35■□□□□ 0.69
TIMP1P01033 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.35■□□□□ 0.69
TIMP1P01033 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.35■□□□□ 0.69
TIMP1P01033 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TIMP1P01033 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TIMP1P01033 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.35■□□□□ 0.69
TIMP1P01033 KRT19P2-202ENST00000557173 1012 ntBASIC19.35■□□□□ 0.69
TIMP1P01033 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.35■□□□□ 0.69
TIMP1P01033 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 AC010507.1-201ENST00000633895 436 ntBASIC19.35■□□□□ 0.69
TIMP1P01033 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.35■□□□□ 0.69
TIMP1P01033 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.35■□□□□ 0.69
TIMP1P01033 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMP1P01033 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.34■□□□□ 0.69
TIMP1P01033 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 AC148477.5-201ENST00000625164 1645 ntBASIC19.34■□□□□ 0.69
TIMP1P01033 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.34■□□□□ 0.69
TIMP1P01033 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 MRPL20P1-201ENST00000400819 433 ntBASIC19.34■□□□□ 0.69
TIMP1P01033 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.34■□□□□ 0.69
TIMP1P01033 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 AC004449.1-201ENST00000564240 433 ntBASIC19.34■□□□□ 0.69
TIMP1P01033 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 GMCL1P1-201ENST00000463439 1581 ntBASIC19.34■□□□□ 0.69
TIMP1P01033 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TIMP1P01033 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 AC132938.5-201ENST00000624980 1813 ntBASIC19.34■□□□□ 0.69
TIMP1P01033 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMP1P01033 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMP1P01033 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
TIMP1P01033 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TIMP1P01033 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.33■□□□□ 0.69
TIMP1P01033 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.33■□□□□ 0.69
TIMP1P01033 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TIMP1P01033 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.33■□□□□ 0.69
TIMP1P01033 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.33■□□□□ 0.68
TIMP1P01033 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.33■□□□□ 0.68
TIMP1P01033 FAM58CP-201ENST00000435741 640 ntBASIC19.33■□□□□ 0.68
TIMP1P01033 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.33■□□□□ 0.68
TIMP1P01033 AC093512.1-201ENST00000617969 520 ntBASIC19.33■□□□□ 0.68
TIMP1P01033 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.33■□□□□ 0.68
TIMP1P01033 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
TIMP1P01033 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.33■□□□□ 0.68
TIMP1P01033 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms