Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 KRT89P-201ENST00000620027 1478 ntBASIC16.07■□□□□ 0.16
CLDN1O95832 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLDN1O95832 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.06■□□□□ 0.16
CLDN1O95832 AL512353.2-201ENST00000448759 1962 ntBASIC16.06■□□□□ 0.16
CLDN1O95832 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDN1O95832 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN1O95832 AC244107.1-201ENST00000442033 332 ntBASIC16.06■□□□□ 0.16
CLDN1O95832 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.06■□□□□ 0.16
CLDN1O95832 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN1O95832 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN1O95832 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 AL596442.2-201ENST00000610240 980 ntBASIC16.06■□□□□ 0.16
CLDN1O95832 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN1O95832 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN1O95832 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 TP73-AS1-210ENST00000637775 1455 ntBASIC16.05■□□□□ 0.16
CLDN1O95832 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 AC211486.1-202ENST00000416371 468 ntBASIC16.05■□□□□ 0.16
CLDN1O95832 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 AC211476.1-201ENST00000503899 468 ntBASIC16.05■□□□□ 0.16
CLDN1O95832 RNA5SP416-201ENST00000516838 111 ntBASIC16.05■□□□□ 0.16
CLDN1O95832 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN1O95832 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN1O95832 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN1O95832 AC092364.2-202ENST00000597012 1073 ntBASIC16.05■□□□□ 0.16
CLDN1O95832 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN1O95832 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN1O95832 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN1O95832 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms