Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM16O95361 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM16O95361 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM16O95361 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM16O95361 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM16O95361 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM16O95361 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM16O95361 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 KRT8P7-201ENST00000533003 1432 ntBASIC18.24■□□□□ 0.51
TRIM16O95361 HOXB1-202ENST00000577092 1414 ntBASIC18.24■□□□□ 0.51
TRIM16O95361 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM16O95361 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM16O95361 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM16O95361 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.24■□□□□ 0.51
TRIM16O95361 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM16O95361 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM16O95361 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM16O95361 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM16O95361 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM16O95361 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM16O95361 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM16O95361 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TRIM16O95361 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM16O95361 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM16O95361 AL590627.1-203ENST00000421194 1026 ntBASIC18.23■□□□□ 0.51
TRIM16O95361 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.23■□□□□ 0.51
TRIM16O95361 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 AC024243.1-201ENST00000609234 778 ntBASIC18.23■□□□□ 0.51
TRIM16O95361 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM16O95361 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM16O95361 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM16O95361 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM16O95361 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM16O95361 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM16O95361 OR6D1P-202ENST00000641007 5290 ntBASIC18.22■□□□□ 0.51
TRIM16O95361 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 AC104819.1-201ENST00000504587 486 ntBASIC18.22■□□□□ 0.51
TRIM16O95361 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms