Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SNCGO76070 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.14□□□□□ -0.47
SNCGO76070 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.14□□□□□ -0.47
SNCGO76070 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.14□□□□□ -0.47
SNCGO76070 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
SNCGO76070 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.14□□□□□ -0.47
SNCGO76070 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 FP325330.2-201ENST00000624219 5630 ntBASIC12.14□□□□□ -0.47
SNCGO76070 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.14□□□□□ -0.47
SNCGO76070 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.14□□□□□ -0.47
SNCGO76070 AC010141.2-201ENST00000452426 721 ntBASIC12.14□□□□□ -0.47
SNCGO76070 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC12.14□□□□□ -0.47
SNCGO76070 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.14□□□□□ -0.47
SNCGO76070 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.14□□□□□ -0.47
SNCGO76070 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 LINC02199-201ENST00000506655 2702 ntBASIC12.14□□□□□ -0.47
SNCGO76070 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 ZNF815P-204ENST00000434898 1737 ntBASIC12.14□□□□□ -0.47
SNCGO76070 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SNCGO76070 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.14□□□□□ -0.47
SNCGO76070 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SNCGO76070 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SNCGO76070 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SNCGO76070 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
SNCGO76070 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.13□□□□□ -0.47
SNCGO76070 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.13□□□□□ -0.47
SNCGO76070 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms