Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SUPT3HO75486 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SUPT3HO75486 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SUPT3HO75486 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
SUPT3HO75486 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
SUPT3HO75486 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SUPT3HO75486 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SUPT3HO75486 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SUPT3HO75486 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC009947.2-201ENST00000444014 672 ntBASIC17.87■□□□□ 0.45
SUPT3HO75486 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.87■□□□□ 0.45
SUPT3HO75486 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC010240.3-201ENST00000607688 395 ntBASIC17.87■□□□□ 0.45
SUPT3HO75486 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.87■□□□□ 0.45
SUPT3HO75486 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SUPT3HO75486 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 FER1L4-210ENST00000615531 5998 ntBASIC17.87■□□□□ 0.45
SUPT3HO75486 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC009053.2-201ENST00000563701 2365 ntBASIC17.87■□□□□ 0.45
SUPT3HO75486 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 AC093010.1-201ENST00000473625 1624 ntBASIC17.87■□□□□ 0.45
SUPT3HO75486 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUPT3HO75486 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 MMP23A-201ENST00000234610 1017 ntBASIC17.86■□□□□ 0.45
SUPT3HO75486 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SUPT3HO75486 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SUPT3HO75486 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.86■□□□□ 0.45
SUPT3HO75486 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.86■□□□□ 0.45
SUPT3HO75486 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.86■□□□□ 0.45
SUPT3HO75486 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.86■□□□□ 0.45
SUPT3HO75486 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.86■□□□□ 0.45
SUPT3HO75486 MIR3180-4-201ENST00000582223 153 ntBASIC17.86■□□□□ 0.45
SUPT3HO75486 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.86■□□□□ 0.45
SUPT3HO75486 AC010947.1-201ENST00000623454 693 ntBASIC17.86■□□□□ 0.45
SUPT3HO75486 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SUPT3HO75486 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.86■□□□□ 0.45
SUPT3HO75486 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.86■□□□□ 0.45
SUPT3HO75486 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SUPT3HO75486 AL024508.2-201ENST00000607749 1894 ntBASIC17.86■□□□□ 0.45
SUPT3HO75486 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUPT3HO75486 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.86■□□□□ 0.45
SUPT3HO75486 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SUPT3HO75486 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUPT3HO75486 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.85■□□□□ 0.45
SUPT3HO75486 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms