Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCN2BO60939 AC128688.1-201ENST00000487626 519 ntBASIC17.1■□□□□ 0.33
SCN2BO60939 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SCN2BO60939 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN2BO60939 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCN2BO60939 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.1■□□□□ 0.33
SCN2BO60939 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN2BO60939 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN2BO60939 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCN2BO60939 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
SCN2BO60939 MIR3917-201ENST00000580971 93 ntBASIC17.09■□□□□ 0.33
SCN2BO60939 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.09■□□□□ 0.33
SCN2BO60939 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN2BO60939 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN2BO60939 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SCN2BO60939 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN2BO60939 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.08■□□□□ 0.33
SCN2BO60939 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.08■□□□□ 0.33
SCN2BO60939 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCN2BO60939 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.08■□□□□ 0.33
SCN2BO60939 AC108860.2-201ENST00000562760 2183 ntBASIC17.08■□□□□ 0.33
SCN2BO60939 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN2BO60939 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SCN2BO60939 LINC00167-201ENST00000530583 1419 ntBASIC17.08■□□□□ 0.32
SCN2BO60939 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCN2BO60939 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN2BO60939 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
SCN2BO60939 MMP23A-201ENST00000234610 1017 ntBASIC17.08■□□□□ 0.32
SCN2BO60939 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN2BO60939 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SCN2BO60939 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN2BO60939 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN2BO60939 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
SCN2BO60939 NEK4P2-201ENST00000580004 1012 ntBASIC17.08■□□□□ 0.32
SCN2BO60939 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.08■□□□□ 0.32
SCN2BO60939 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN2BO60939 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SCN2BO60939 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.08■□□□□ 0.32
SCN2BO60939 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SCN2BO60939 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCN2BO60939 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCN2BO60939 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCN2BO60939 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN2BO60939 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms