Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KLHL41O60662 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KLHL41O60662 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KLHL41O60662 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KLHL41O60662 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KLHL41O60662 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KLHL41O60662 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KLHL41O60662 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.9■□□□□ 0.46
KLHL41O60662 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 AC108860.2-201ENST00000562760 2183 ntBASIC17.9■□□□□ 0.46
KLHL41O60662 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL41O60662 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KLHL41O60662 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KLHL41O60662 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
KLHL41O60662 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
KLHL41O60662 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 AC099343.3-201ENST00000605834 2503 ntBASIC17.89■□□□□ 0.45
KLHL41O60662 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
KLHL41O60662 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.89■□□□□ 0.45
KLHL41O60662 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 AC091076.1-201ENST00000610741 619 ntBASIC17.89■□□□□ 0.45
KLHL41O60662 FAM87A-204ENST00000613235 858 ntBASIC17.89■□□□□ 0.45
KLHL41O60662 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.89■□□□□ 0.45
KLHL41O60662 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
KLHL41O60662 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL41O60662 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL41O60662 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.88■□□□□ 0.45
KLHL41O60662 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KLHL41O60662 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL41O60662 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.88■□□□□ 0.45
KLHL41O60662 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.88■□□□□ 0.45
KLHL41O60662 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.88■□□□□ 0.45
KLHL41O60662 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL41O60662 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL41O60662 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
KLHL41O60662 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL41O60662 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL41O60662 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KLHL41O60662 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL41O60662 RNF152P1-201ENST00000397754 604 ntBASIC17.87■□□□□ 0.45
KLHL41O60662 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KLHL41O60662 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL41O60662 AC063952.2-201ENST00000498792 1227 ntBASIC17.87■□□□□ 0.45
KLHL41O60662 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL41O60662 AC022616.7-201ENST00000525383 220 ntBASIC17.87■□□□□ 0.45
KLHL41O60662 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
KLHL41O60662 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL41O60662 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL41O60662 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms