Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDH7O60245 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDH7O60245 AL441883.1-201ENST00000566170 1045 ntBASIC17.22■□□□□ 0.35
PCDH7O60245 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDH7O60245 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDH7O60245 AL031432.5-201ENST00000641059 760 ntBASIC17.22■□□□□ 0.35
PCDH7O60245 AC097493.4-201ENST00000641197 219 ntBASIC17.22■□□□□ 0.35
PCDH7O60245 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDH7O60245 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH7O60245 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH7O60245 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH7O60245 LINC00167-201ENST00000530583 1419 ntBASIC17.21■□□□□ 0.35
PCDH7O60245 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH7O60245 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 LINC00896-202ENST00000609602 2128 ntBASIC17.21■□□□□ 0.35
PCDH7O60245 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDH7O60245 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDH7O60245 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDH7O60245 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 AC006116.8-202ENST00000587620 1550 ntBASIC17.21■□□□□ 0.35
PCDH7O60245 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 TERF1P1-201ENST00000311003 1181 ntBASIC17.21■□□□□ 0.35
PCDH7O60245 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH7O60245 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH7O60245 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH7O60245 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH7O60245 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH7O60245 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH7O60245 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH7O60245 LINC00602-201ENST00000629776 2065 ntBASIC17.2■□□□□ 0.34
PCDH7O60245 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PCDH7O60245 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH7O60245 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH7O60245 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH7O60245 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms