Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC116407.2-201ENST00000613639 860 ntBASIC17.64■□□□□ 0.41
VEGFDO43915 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.64■□□□□ 0.41
VEGFDO43915 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VEGFDO43915 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.64■□□□□ 0.41
VEGFDO43915 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VEGFDO43915 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.64■□□□□ 0.41
VEGFDO43915 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.64■□□□□ 0.41
VEGFDO43915 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VEGFDO43915 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
VEGFDO43915 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VEGFDO43915 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
VEGFDO43915 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.63■□□□□ 0.41
VEGFDO43915 AC138932.1-201ENST00000534164 6830 ntBASIC17.63■□□□□ 0.41
VEGFDO43915 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.63■□□□□ 0.41
VEGFDO43915 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.63■□□□□ 0.41
VEGFDO43915 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.63■□□□□ 0.41
VEGFDO43915 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.63■□□□□ 0.41
VEGFDO43915 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 KRT8P47-201ENST00000604727 1398 ntBASIC17.63■□□□□ 0.41
VEGFDO43915 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.63■□□□□ 0.41
VEGFDO43915 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VEGFDO43915 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.62■□□□□ 0.41
VEGFDO43915 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.62■□□□□ 0.41
VEGFDO43915 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.62■□□□□ 0.41
VEGFDO43915 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 AP000997.3-201ENST00000623333 2250 ntBASIC17.62■□□□□ 0.41
VEGFDO43915 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
VEGFDO43915 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.62■□□□□ 0.41
VEGFDO43915 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.62■□□□□ 0.41
VEGFDO43915 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.62■□□□□ 0.41
VEGFDO43915 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.62■□□□□ 0.41
VEGFDO43915 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 AL121772.3-201ENST00000610840 674 ntBASIC17.62■□□□□ 0.41
VEGFDO43915 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.62■□□□□ 0.41
VEGFDO43915 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 KRT18P55-202ENST00000578578 1546 ntBASIC17.62■□□□□ 0.41
VEGFDO43915 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.62■□□□□ 0.41
VEGFDO43915 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VEGFDO43915 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VEGFDO43915 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VEGFDO43915 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VEGFDO43915 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.61■□□□□ 0.41
VEGFDO43915 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.61■□□□□ 0.41
VEGFDO43915 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VEGFDO43915 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VEGFDO43915 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VEGFDO43915 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
VEGFDO43915 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.61■□□□□ 0.41
VEGFDO43915 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms