Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AL662844.1-201ENST00000546340 181 ntBASIC18.56■□□□□ 0.56
COCHO43405 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COCHO43405 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COCHO43405 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.56■□□□□ 0.56
COCHO43405 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
COCHO43405 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COCHO43405 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 AC010460.3-201ENST00000511359 1579 ntBASIC18.55■□□□□ 0.56
COCHO43405 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.55■□□□□ 0.56
COCHO43405 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.55■□□□□ 0.56
COCHO43405 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 FAM220CP-201ENST00000395253 831 ntBASIC18.55■□□□□ 0.56
COCHO43405 RBM17P3-201ENST00000417687 1192 ntBASIC18.55■□□□□ 0.56
COCHO43405 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.55■□□□□ 0.56
COCHO43405 ABCD1P5-201ENST00000445663 754 ntBASIC18.55■□□□□ 0.56
COCHO43405 FAM197Y8-203ENST00000450145 560 ntBASIC18.55■□□□□ 0.56
COCHO43405 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 FGFR3P6-201ENST00000457012 610 ntBASIC18.55■□□□□ 0.56
COCHO43405 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COCHO43405 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.55■□□□□ 0.56
COCHO43405 MTDHP3-201ENST00000594186 672 ntBASIC18.55■□□□□ 0.56
COCHO43405 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COCHO43405 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 REXO1L9P-201ENST00000604264 2108 ntBASIC18.55■□□□□ 0.56
COCHO43405 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.55■□□□□ 0.56
COCHO43405 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 AC009113.1-201ENST00000570267 2443 ntBASIC18.54■□□□□ 0.56
COCHO43405 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COCHO43405 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.54■□□□□ 0.56
COCHO43405 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.54■□□□□ 0.56
COCHO43405 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 AP005117.1-201ENST00000584346 1413 ntBASIC18.54■□□□□ 0.56
COCHO43405 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.54■□□□□ 0.56
COCHO43405 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
COCHO43405 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COCHO43405 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COCHO43405 HLA-A-201ENST00000376802 1334 ntBASIC18.53■□□□□ 0.56
COCHO43405 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COCHO43405 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.53■□□□□ 0.56
COCHO43405 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.53■□□□□ 0.56
COCHO43405 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COCHO43405 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.53■□□□□ 0.56
COCHO43405 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COCHO43405 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.53■□□□□ 0.56
COCHO43405 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COCHO43405 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COCHO43405 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COCHO43405 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms