Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PHGDHO43175 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHGDHO43175 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.94■□□□□ 0.46
PHGDHO43175 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PHGDHO43175 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.93■□□□□ 0.46
PHGDHO43175 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
PHGDHO43175 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PHGDHO43175 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.93■□□□□ 0.46
PHGDHO43175 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.93■□□□□ 0.46
PHGDHO43175 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.93■□□□□ 0.46
PHGDHO43175 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PHGDHO43175 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PHGDHO43175 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PHGDHO43175 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHGDHO43175 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.92■□□□□ 0.46
PHGDHO43175 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.92■□□□□ 0.46
PHGDHO43175 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.92■□□□□ 0.46
PHGDHO43175 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
PHGDHO43175 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
PHGDHO43175 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHGDHO43175 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.92■□□□□ 0.46
PHGDHO43175 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.92■□□□□ 0.46
PHGDHO43175 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PHGDHO43175 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PHGDHO43175 AL645608.8-201ENST00000606034 2086 ntBASIC17.92■□□□□ 0.46
PHGDHO43175 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PHGDHO43175 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHGDHO43175 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.92■□□□□ 0.46
PHGDHO43175 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.91■□□□□ 0.46
PHGDHO43175 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.91■□□□□ 0.46
PHGDHO43175 HMGA1P5-201ENST00000412453 271 ntBASIC17.91■□□□□ 0.46
PHGDHO43175 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 MIR3917-201ENST00000580971 93 ntBASIC17.91■□□□□ 0.46
PHGDHO43175 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.91■□□□□ 0.46
PHGDHO43175 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.91■□□□□ 0.46
PHGDHO43175 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms