Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF113AO15541 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 NOC2LP1-202ENST00000452600 2235 ntBASIC21.58■■□□□ 1.05
RNF113AO15541 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF113AO15541 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 IGHV3-47-201ENST00000425060 335 ntBASIC21.58■■□□□ 1.05
RNF113AO15541 VENTXP7-201ENST00000475503 772 ntBASIC21.58■■□□□ 1.05
RNF113AO15541 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF113AO15541 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 Z69720.1-201ENST00000601483 472 ntBASIC21.58■■□□□ 1.05
RNF113AO15541 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF113AO15541 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF113AO15541 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.58■■□□□ 1.05
RNF113AO15541 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF113AO15541 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF113AO15541 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RNF113AO15541 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RNF113AO15541 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
RNF113AO15541 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF113AO15541 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RNF113AO15541 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
RNF113AO15541 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF113AO15541 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF113AO15541 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
RNF113AO15541 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF113AO15541 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF113AO15541 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF113AO15541 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.56■■□□□ 1.04
RNF113AO15541 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF113AO15541 AC125634.1-201ENST00000438758 1403 ntBASIC21.56■■□□□ 1.04
RNF113AO15541 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF113AO15541 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF113AO15541 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF113AO15541 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF113AO15541 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RNF113AO15541 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF113AO15541 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 AC074051.2-201ENST00000565115 352 ntBASIC21.56■■□□□ 1.04
RNF113AO15541 AC012615.1-201ENST00000565797 1299 ntBASIC21.56■■□□□ 1.04
RNF113AO15541 AL138831.2-201ENST00000606564 490 ntBASIC21.56■■□□□ 1.04
RNF113AO15541 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF113AO15541 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 NSUN5P1-202ENST00000421140 1535 ntBASIC21.55■■□□□ 1.04
RNF113AO15541 NSUN5P2-203ENST00000457352 1529 ntBASIC21.55■■□□□ 1.04
RNF113AO15541 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF113AO15541 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF113AO15541 KRT18P56-201ENST00000507275 550 ntBASIC21.55■■□□□ 1.04
RNF113AO15541 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF113AO15541 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF113AO15541 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF113AO15541 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF113AO15541 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF113AO15541 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF113AO15541 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF113AO15541 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF113AO15541 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF113AO15541 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF113AO15541 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF113AO15541 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF113AO15541 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms