Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF444P1-201ENST00000559497 298 ntBASIC16.37■□□□□ 0.21
SMAD9O15198 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SMAD9O15198 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SMAD9O15198 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.37■□□□□ 0.21
SMAD9O15198 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SMAD9O15198 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.37■□□□□ 0.21
SMAD9O15198 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.36■□□□□ 0.21
SMAD9O15198 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.36■□□□□ 0.21
SMAD9O15198 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 ARMC10P1-201ENST00000313754 855 ntBASIC16.36■□□□□ 0.21
SMAD9O15198 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.36■□□□□ 0.21
SMAD9O15198 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMAD9O15198 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.36■□□□□ 0.21
SMAD9O15198 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMAD9O15198 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMAD9O15198 AC090164.3-201ENST00000610780 2143 ntBASIC16.36■□□□□ 0.21
SMAD9O15198 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
SMAD9O15198 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.36■□□□□ 0.21
SMAD9O15198 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 AL024508.2-201ENST00000607749 1894 ntBASIC16.35■□□□□ 0.21
SMAD9O15198 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.35■□□□□ 0.21
SMAD9O15198 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.35■□□□□ 0.21
SMAD9O15198 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 AL121956.5-201ENST00000625261 221 ntBASIC16.35■□□□□ 0.21
SMAD9O15198 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.35■□□□□ 0.21
SMAD9O15198 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 AC135050.7-201ENST00000624508 2218 ntBASIC16.35■□□□□ 0.21
SMAD9O15198 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.35■□□□□ 0.21
SMAD9O15198 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SMAD9O15198 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.35■□□□□ 0.21
SMAD9O15198 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SMAD9O15198 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMAD9O15198 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms