Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.12■□□□□ 0.33
CASQ2O14958 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CASQ2O14958 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.12■□□□□ 0.33
CASQ2O14958 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASQ2O14958 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CASQ2O14958 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASQ2O14958 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CASQ2O14958 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 AL512625.2-201ENST00000417533 625 ntBASIC17.11■□□□□ 0.33
CASQ2O14958 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.11■□□□□ 0.33
CASQ2O14958 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.11■□□□□ 0.33
CASQ2O14958 AC092437.1-201ENST00000624794 1048 ntBASIC17.11■□□□□ 0.33
CASQ2O14958 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.11■□□□□ 0.33
CASQ2O14958 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CASQ2O14958 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CASQ2O14958 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CASQ2O14958 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASQ2O14958 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CASQ2O14958 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CASQ2O14958 POU5F1P3-201ENST00000428824 1078 ntBASIC17.1■□□□□ 0.33
CASQ2O14958 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 AC142381.2-201ENST00000566120 298 ntBASIC17.1■□□□□ 0.33
CASQ2O14958 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CASQ2O14958 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 FLJ38576-201ENST00000623820 2459 ntBASIC17.1■□□□□ 0.33
CASQ2O14958 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
CASQ2O14958 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASQ2O14958 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.1■□□□□ 0.33
CASQ2O14958 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
CASQ2O14958 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASQ2O14958 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CASQ2O14958 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms