Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 ZNF259P1-201ENST00000407656 1365 ntBASIC20.83■□□□□ 0.92
USP17L11C9JVI0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.83■□□□□ 0.92
USP17L11C9JVI0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 AL356309.3-201ENST00000624132 1934 ntBASIC20.82■□□□□ 0.92
USP17L11C9JVI0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.82■□□□□ 0.92
USP17L11C9JVI0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
USP17L11C9JVI0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 AC104581.1-202ENST00000635932 2618 ntBASIC20.81■□□□□ 0.92
USP17L11C9JVI0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 TERC-201ENST00000602385 541 ntBASIC20.81■□□□□ 0.92
USP17L11C9JVI0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP17L11C9JVI0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 PMS2P7-201ENST00000506558 1336 ntBASIC20.8■□□□□ 0.92
USP17L11C9JVI0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 RPS2P1-201ENST00000434010 821 ntBASIC20.8■□□□□ 0.92
USP17L11C9JVI0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
USP17L11C9JVI0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.79■□□□□ 0.92
USP17L11C9JVI0 MIR940-201ENST00000401276 94 ntBASIC20.79■□□□□ 0.92
USP17L11C9JVI0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms