Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 PCDH8P1-201ENST00000428983 2773 ntBASIC19.54■□□□□ 0.72
CCDC66A2RUB6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CCDC66A2RUB6 AC108860.2-201ENST00000562760 2183 ntBASIC19.53■□□□□ 0.72
CCDC66A2RUB6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 FAM207BP-201ENST00000447172 505 ntBASIC19.53■□□□□ 0.72
CCDC66A2RUB6 AC128676.1-201ENST00000454392 318 ntBASIC19.53■□□□□ 0.72
CCDC66A2RUB6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 C1QBPP2-201ENST00000528754 825 ntBASIC19.53■□□□□ 0.72
CCDC66A2RUB6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC66A2RUB6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 AC008040.2-201ENST00000461049 708 ntBASIC19.52■□□□□ 0.72
CCDC66A2RUB6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 RARRES2P10-201ENST00000564312 460 ntBASIC19.52■□□□□ 0.72
CCDC66A2RUB6 AC073195.1-201ENST00000607241 877 ntBASIC19.52■□□□□ 0.72
CCDC66A2RUB6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC66A2RUB6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC66A2RUB6 AL109659.2-201ENST00000606809 1674 ntBASIC19.52■□□□□ 0.71
CCDC66A2RUB6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CCDC66A2RUB6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC66A2RUB6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC66A2RUB6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 KRT18P41-201ENST00000518924 1277 ntBASIC19.51■□□□□ 0.71
CCDC66A2RUB6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 AF186192.3-201ENST00000583427 947 ntBASIC19.51■□□□□ 0.71
CCDC66A2RUB6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC66A2RUB6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC66A2RUB6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms