Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 AL078644.1-201ENST00000609881 752 ntBASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 SIRPAP1-201ENST00000448467 1770 ntBASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC132938.5-201ENST00000624980 1813 ntBASIC22.78■■□□□ 1.24
LOC102724428A0A0B4J2F2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 PRSS29P-201ENST00000440800 595 ntBASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 AC008667.4-201ENST00000607370 168 ntBASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LOC102724428A0A0B4J2F2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.77■■□□□ 1.23
LOC102724428A0A0B4J2F2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 MKNK2P1-201ENST00000437526 628 ntBASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 RPS15P9-201ENST00000494093 319 ntBASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 GPR89P-201ENST00000407924 1495 ntBASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL049757.1-201ENST00000616842 1596 ntBASIC22.76■■□□□ 1.23
LOC102724428A0A0B4J2F2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 ELL2P1-201ENST00000413990 1906 ntBASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL645939.2-201ENST00000427340 991 ntBASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 AC004790.2-201ENST00000623588 572 ntBASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LOC102724428A0A0B4J2F2 NCF1C-201ENST00000438382 1427 ntBASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 AP002472.1-201ENST00000577490 586 ntBASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LOC102724428A0A0B4J2F2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms