Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 LINC00265-3P-201ENST00000447588 903 ntBASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 IFNL4P1-201ENST00000607083 540 ntBASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB11Q9Y5F2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 AL133373.2-201ENST00000623187 2828 ntBASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 UNC93B7-201ENST00000509439 705 ntBASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB11Q9Y5F2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB11Q9Y5F2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.64■□□□□ 0.42
PCDHB11Q9Y5F2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB11Q9Y5F2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB11Q9Y5F2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB11Q9Y5F2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 DRAXINP1-201ENST00000437611 948 ntBASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms