Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF11Q9Y3C5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 AC087499.1-201ENST00000418141 1075 ntBASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 ECEL1P3-201ENST00000427961 737 ntBASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 NEK4P2-201ENST00000580004 1012 ntBASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 KRT18P22-201ENST00000402024 1347 ntBASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF11Q9Y3C5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF11Q9Y3C5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF11Q9Y3C5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 MIR3917-201ENST00000580971 93 ntBASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF11Q9Y3C5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF11Q9Y3C5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms