Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MRPL3P1-201ENST00000400109 1033 ntBASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 AF238378.1-201ENST00000526806 358 ntBASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 BNIP3P18-201ENST00000593976 575 ntBASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 AC114341.1-201ENST00000618070 349 ntBASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX2IPQ9Y2D8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 BX640515.1-201ENST00000617215 977 ntBASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX2IPQ9Y2D8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 HLA-A-201ENST00000376802 1334 ntBASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 AC096582.2-201ENST00000510860 516 ntBASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX2IPQ9Y2D8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms