Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 MIR1238-201ENST00000408483 83 ntBASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 FITM1-202ENST00000559294 800 ntBASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 AC010240.3-201ENST00000607688 395 ntBASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 AC116562.4-202ENST00000641738 218 ntBASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2BQ9UQN3 AC080080.1-201ENST00000625121 2420 ntBASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 AL139384.1-201ENST00000612143 3047 ntBASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 AC100803.2-201ENST00000562459 1963 ntBASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP2BQ9UQN3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 AC008550.1-201ENST00000511500 884 ntBASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 MIR3180-4-201ENST00000582223 153 ntBASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 MIR4785-201ENST00000585005 73 ntBASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 AC132938.6-201ENST00000623828 1655 ntBASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP2BQ9UQN3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms