Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 TERC-201ENST00000602385 541 ntBASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 FAM220CP-201ENST00000395253 831 ntBASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 BX842568.4-201ENST00000421222 227 ntBASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.92□□□□□ -0.18
NOTCH3Q9UM47 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 KRT8P32-201ENST00000512863 1461 ntBASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms