Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 FLJ16779-201ENST00000612722 7638 ntBASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHCHD3Q9NX63 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 BX276092.2-201ENST00000417668 665 ntBASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 AC006015.1-201ENST00000429970 570 ntBASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHCHD3Q9NX63 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 AC133552.2-202ENST00000575694 574 ntBASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHCHD3Q9NX63 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHCHD3Q9NX63 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.78■□□□□ 0.28
CHCHD3Q9NX63 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD3Q9NX63 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHCHD3Q9NX63 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms