Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 SEC1P-202ENST00000473944 940 ntBASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AC010240.3-201ENST00000607688 395 ntBASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RLIMQ9NVW2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 AL024508.2-201ENST00000607749 1894 ntBASIC16.8■□□□□ 0.28
RLIMQ9NVW2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 HMGA1P5-201ENST00000412453 271 ntBASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RLIMQ9NVW2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RLIMQ9NVW2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms