Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 UNC93B2-201ENST00000285383 730 ntBASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 AC008687.5-201ENST00000593746 558 ntBASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 PRORSD1P-201ENST00000295112 541 ntBASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 AC092338.2-201ENST00000568827 1415 ntBASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOMER3Q9NSC5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 AC116562.4-202ENST00000641738 218 ntBASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOMER3Q9NSC5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 GCSHP5-201ENST00000443090 522 ntBASIC18.77■□□□□ 0.6
HOMER3Q9NSC5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms