Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 KRT18P65-201ENST00000439811 1286 ntBASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 GPR32P1-201ENST00000601788 811 ntBASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 AC004263.2-201ENST00000617183 678 ntBASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 AC018470.1-201ENST00000624790 3129 ntBASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN4Q9NRR5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 SPDYE13P-201ENST00000445314 798 ntBASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 KRT18P55-202ENST00000578578 1546 ntBASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN4Q9NRR5 NOC2LP2-201ENST00000407594 1944 ntBASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN4Q9NRR5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AC005332.3-201ENST00000589904 676 ntBASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 NTF6B-201ENST00000591913 560 ntBASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AC009154.2-201ENST00000621177 724 ntBASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AL353692.3-201ENST00000407031 1396 ntBASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 OR6D1P-202ENST00000641007 5290 ntBASIC16.58■□□□□ 0.24
UBQLN4Q9NRR5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 AC008764.6-201ENST00000595909 2069 ntBASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN4Q9NRR5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms