Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
HES4Q9HCC6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HES4Q9HCC6 AL136038.4-201ENST00000603606 1261 ntBASIC15.27■□□□□ 0.04
HES4Q9HCC6 AC006011.2-201ENST00000621313 1158 ntBASIC15.27■□□□□ 0.04
HES4Q9HCC6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HES4Q9HCC6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HES4Q9HCC6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HES4Q9HCC6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HES4Q9HCC6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
HES4Q9HCC6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HES4Q9HCC6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HES4Q9HCC6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
HES4Q9HCC6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.27■□□□□ 0.03
HES4Q9HCC6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 RNF152P1-201ENST00000397754 604 ntBASIC15.26■□□□□ 0.03
HES4Q9HCC6 KRT18P57-201ENST00000443599 1254 ntBASIC15.26■□□□□ 0.03
HES4Q9HCC6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 KRT18P55-202ENST00000578578 1546 ntBASIC15.26■□□□□ 0.03
HES4Q9HCC6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HES4Q9HCC6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HES4Q9HCC6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 TSPY5P-201ENST00000426936 936 ntBASIC15.25■□□□□ 0.03
HES4Q9HCC6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 HOMER2P1-201ENST00000455653 964 ntBASIC15.25■□□□□ 0.03
HES4Q9HCC6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 AC024563.2-201ENST00000603282 481 ntBASIC15.25■□□□□ 0.03
HES4Q9HCC6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HES4Q9HCC6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.25■□□□□ 0.03
HES4Q9HCC6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HES4Q9HCC6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HES4Q9HCC6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HES4Q9HCC6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HES4Q9HCC6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HES4Q9HCC6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HES4Q9HCC6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HES4Q9HCC6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms