Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 INTS4P1-201ENST00000438455 1935 ntBASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 BICD1-207ENST00000551848 1962 ntBASIC20.23■□□□□ 0.83
BCAS3Q9H6U6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 AC079776.4-201ENST00000511039 504 ntBASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 AP001269.4-201ENST00000609611 512 ntBASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCAS3Q9H6U6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCAS3Q9H6U6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
BCAS3Q9H6U6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCAS3Q9H6U6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BCAS3Q9H6U6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
BCAS3Q9H6U6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BCAS3Q9H6U6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms