Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 AC141257.4-201ENST00000634557 245 ntBASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 AC136944.6-201ENST00000634818 245 ntBASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 AL133373.2-201ENST00000623187 2828 ntBASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC68Q9H2F9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 SLC25A3P1-201ENST00000443844 931 ntBASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 MIR3917-201ENST00000580971 93 ntBASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 AC073912.3-201ENST00000624414 853 ntBASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 AC133561.5-201ENST00000635547 218 ntBASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC68Q9H2F9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC68Q9H2F9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 AC034232.1-201ENST00000506026 1064 ntBASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 AC140113.3-201ENST00000605663 199 ntBASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC68Q9H2F9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC68Q9H2F9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms