Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.9□□□□□ -0.19
SHANK2-AS3Q9BTD1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC007663.1-201ENST00000438948 1240 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 FITM1-202ENST00000559294 800 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 C2orf69P3-201ENST00000565542 1120 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC008687.5-201ENST00000593746 558 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AL023806.1-201ENST00000603994 1649 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC141586.5-201ENST00000624546 2050 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC022898.2-201ENST00000616822 1312 ntBASIC13.89□□□□□ -0.19
SHANK2-AS3Q9BTD1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PP12613-201ENST00000424958 2230 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC108860.2-201ENST00000562760 2183 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 Z99916.2-201ENST00000604037 246 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AP000525.1-201ENST00000608286 694 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC010653.2-201ENST00000623505 997 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 AC132938.6-201ENST00000623828 1655 ntBASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHANK2-AS3Q9BTD1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHANK2-AS3Q9BTD1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms