Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.1■□□□□ 0.49
NDNQ99608 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 AC009065.1-201ENST00000564055 1225 ntBASIC18.1■□□□□ 0.49
NDNQ99608 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.1■□□□□ 0.49
NDNQ99608 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.1■□□□□ 0.49
NDNQ99608 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.1■□□□□ 0.49
NDNQ99608 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
NDNQ99608 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
NDNQ99608 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
NDNQ99608 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NDNQ99608 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NDNQ99608 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NDNQ99608 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 AC087499.1-201ENST00000418141 1075 ntBASIC18.09■□□□□ 0.49
NDNQ99608 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.09■□□□□ 0.49
NDNQ99608 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.09■□□□□ 0.49
NDNQ99608 MIR3180-4-201ENST00000582223 153 ntBASIC18.09■□□□□ 0.49
NDNQ99608 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.09■□□□□ 0.49
NDNQ99608 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.09■□□□□ 0.49
NDNQ99608 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NDNQ99608 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDNQ99608 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
NDNQ99608 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.09■□□□□ 0.49
NDNQ99608 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDNQ99608 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
NDNQ99608 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.08■□□□□ 0.49
NDNQ99608 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NDNQ99608 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.08■□□□□ 0.49
NDNQ99608 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
NDNQ99608 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.08■□□□□ 0.48
NDNQ99608 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
NDNQ99608 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.08■□□□□ 0.48
NDNQ99608 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.08■□□□□ 0.48
NDNQ99608 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.08■□□□□ 0.48
NDNQ99608 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NDNQ99608 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NDNQ99608 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NDNQ99608 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NDNQ99608 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDNQ99608 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms