Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL590627.1-203ENST00000421194 1026 ntBASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 NKAPP1-205ENST00000585790 367 ntBASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 KRT18P27-201ENST00000427733 1299 ntBASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 PMS2P1-201ENST00000431037 1228 ntBASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP2Q96SN8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 PGAM5P1-201ENST00000518923 814 ntBASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP2Q96SN8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 NCF1C-201ENST00000438382 1427 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC090164.3-201ENST00000610780 2143 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC022898.2-201ENST00000616822 1312 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 KRT18P58-201ENST00000527480 1120 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 AC064862.7-201ENST00000604520 867 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP2Q96SN8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 BX276092.7-203ENST00000637198 1536 ntBASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 FAM220CP-201ENST00000395253 831 ntBASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 AC117500.6-201ENST00000624871 588 ntBASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP2Q96SN8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK5RAP2Q96SN8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CDK5RAP2Q96SN8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK5RAP2Q96SN8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms