Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL21A1Q96P44 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL21A1Q96P44 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL21A1Q96P44 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
COL21A1Q96P44 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COL21A1Q96P44 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL21A1Q96P44 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL21A1Q96P44 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
COL21A1Q96P44 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 AL096828.2-201ENST00000567259 1965 ntBASIC17.06■□□□□ 0.32
COL21A1Q96P44 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 AC117947.1-201ENST00000427448 529 ntBASIC17.06■□□□□ 0.32
COL21A1Q96P44 AC104390.1-201ENST00000555663 520 ntBASIC17.06■□□□□ 0.32
COL21A1Q96P44 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 AC011558.1-201ENST00000623459 338 ntBASIC17.06■□□□□ 0.32
COL21A1Q96P44 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 SIRPAP1-201ENST00000448467 1770 ntBASIC17.06■□□□□ 0.32
COL21A1Q96P44 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL21A1Q96P44 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COL21A1Q96P44 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 AC134043.2-201ENST00000624206 2238 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 AK4P3-201ENST00000418260 669 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 SEC1P-202ENST00000473944 940 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 GCSHP2-201ENST00000560971 527 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 AC006011.2-201ENST00000621313 1158 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 AL163051.1-201ENST00000569214 1512 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL21A1Q96P44 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.05■□□□□ 0.32
COL21A1Q96P44 PHGDH-209ENST00000641074 1780 ntBASIC17.05■□□□□ 0.32
COL21A1Q96P44 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 RNF152P1-201ENST00000397754 604 ntBASIC17.04■□□□□ 0.32
COL21A1Q96P44 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 AC104076.2-201ENST00000448912 469 ntBASIC17.04■□□□□ 0.32
COL21A1Q96P44 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 AL441883.1-201ENST00000566170 1045 ntBASIC17.04■□□□□ 0.32
COL21A1Q96P44 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 FLJ13224-201ENST00000313737 1514 ntBASIC17.04■□□□□ 0.32
COL21A1Q96P44 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.04■□□□□ 0.32
COL21A1Q96P44 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL21A1Q96P44 AC009102.3-201ENST00000623118 1491 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms