Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.8□□□□□ -0.2
LINC00479Q96M42 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00479Q96M42 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00479Q96M42 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 MIR935-201ENST00000401179 91 ntBASIC13.79□□□□□ -0.2
LINC00479Q96M42 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 AC008403.3-201ENST00000598924 454 ntBASIC13.79□□□□□ -0.2
LINC00479Q96M42 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00479Q96M42 AC093010.1-201ENST00000473625 1624 ntBASIC13.79□□□□□ -0.2
LINC00479Q96M42 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.79□□□□□ -0.2
LINC00479Q96M42 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00479Q96M42 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PCDH8P1-201ENST00000428983 2773 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 KRASP1-201ENST00000407852 552 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 AC008040.2-201ENST00000461049 708 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 UNC93B5-201ENST00000530315 699 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 AC233263.1-201ENST00000578059 224 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.78□□□□□ -0.2
LINC00479Q96M42 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LINC00479Q96M42 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00479Q96M42 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms