Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 PRORSD1P-202ENST00000563365 2154 ntBASIC17.19■□□□□ 0.34
ITCHQ96J02 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.19■□□□□ 0.34
ITCHQ96J02 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.19■□□□□ 0.34
ITCHQ96J02 GCSHP5-201ENST00000443090 522 ntBASIC17.19■□□□□ 0.34
ITCHQ96J02 AC098590.1-201ENST00000468126 897 ntBASIC17.19■□□□□ 0.34
ITCHQ96J02 AP003071.4-201ENST00000562276 1284 ntBASIC17.19■□□□□ 0.34
ITCHQ96J02 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ITCHQ96J02 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 AL645608.8-201ENST00000606034 2086 ntBASIC17.19■□□□□ 0.34
ITCHQ96J02 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.19■□□□□ 0.34
ITCHQ96J02 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ITCHQ96J02 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.18■□□□□ 0.34
ITCHQ96J02 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.18■□□□□ 0.34
ITCHQ96J02 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.18■□□□□ 0.34
ITCHQ96J02 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 UNC93B2-201ENST00000285383 730 ntBASIC17.18■□□□□ 0.34
ITCHQ96J02 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ITCHQ96J02 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.18■□□□□ 0.34
ITCHQ96J02 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.18■□□□□ 0.34
ITCHQ96J02 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.18■□□□□ 0.34
ITCHQ96J02 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITCHQ96J02 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ITCHQ96J02 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.17■□□□□ 0.34
ITCHQ96J02 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ITCHQ96J02 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.17■□□□□ 0.34
ITCHQ96J02 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.17■□□□□ 0.34
ITCHQ96J02 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.17■□□□□ 0.34
ITCHQ96J02 DUTP2-201ENST00000519164 463 ntBASIC17.17■□□□□ 0.34
ITCHQ96J02 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 AC092338.2-201ENST00000568827 1415 ntBASIC17.17■□□□□ 0.34
ITCHQ96J02 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.17■□□□□ 0.34
ITCHQ96J02 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.17■□□□□ 0.34
ITCHQ96J02 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ITCHQ96J02 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.17■□□□□ 0.34
ITCHQ96J02 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ITCHQ96J02 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ITCHQ96J02 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ITCHQ96J02 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
ITCHQ96J02 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms