Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 AL049637.2-201ENST00000641778 930 ntBASIC15.69■□□□□ 0.1
CPNE2Q96FN4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE2Q96FN4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PHGDH-209ENST00000641074 1780 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 UNC93B2-201ENST00000285383 730 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 WWOX-216ENST00000569818 525 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AC026471.5-201ENST00000615068 467 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 REXO1L10P-201ENST00000615707 1290 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 REXO1L12P-201ENST00000622156 912 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 AC134043.2-201ENST00000624206 2238 ntBASIC15.68■□□□□ 0.1
CPNE2Q96FN4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE2Q96FN4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.67■□□□□ 0.1
CPNE2Q96FN4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms