Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 AL499627.1-201ENST00000569373 2188 ntBASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 DNAJB3-202ENST00000449667 1266 ntBASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
SNRNP40Q96DI7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 MIR1199-201ENST00000621445 119 ntBASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 AC022898.2-201ENST00000616822 1312 ntBASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNRNP40Q96DI7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SNRNP40Q96DI7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNRNP40Q96DI7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.14■□□□□ 0.18
SNRNP40Q96DI7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 AC211486.1-202ENST00000416371 468 ntBASIC16.14■□□□□ 0.17
SNRNP40Q96DI7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms