Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 AC141586.5-201ENST00000624546 2050 ntBASIC18.22■□□□□ 0.51
LRRC39Q96DD0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 AC100803.2-201ENST00000562459 1963 ntBASIC18.22■□□□□ 0.51
LRRC39Q96DD0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 AC113404.2-201ENST00000507884 177 ntBASIC18.21■□□□□ 0.51
LRRC39Q96DD0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 AC116407.2-201ENST00000613639 860 ntBASIC18.21■□□□□ 0.51
LRRC39Q96DD0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LRRC39Q96DD0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC39Q96DD0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
LRRC39Q96DD0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC39Q96DD0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 INGX-201ENST00000359239 846 ntBASIC18.2■□□□□ 0.5
LRRC39Q96DD0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 AP000523.1-201ENST00000398242 1049 ntBASIC18.2■□□□□ 0.5
LRRC39Q96DD0 HMGA1P5-201ENST00000412453 271 ntBASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 AP006294.2-201ENST00000641667 209 ntBASIC18.2■□□□□ 0.5
LRRC39Q96DD0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC39Q96DD0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 SNORA78-201ENST00000459373 127 ntBASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC39Q96DD0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms