Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC011506.1-201ENST00000474329 610 ntBASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1BQ8WW43 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.31■□□□□ 0.2
APH1BQ8WW43 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 KRT17P3-201ENST00000420566 1262 ntBASIC16.3■□□□□ 0.2
APH1BQ8WW43 AP002982.1-201ENST00000492365 877 ntBASIC16.3■□□□□ 0.2
APH1BQ8WW43 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1BQ8WW43 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APH1BQ8WW43 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 KRT16P1-201ENST00000399124 1418 ntBASIC16.29■□□□□ 0.2
APH1BQ8WW43 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 AP003097.1-201ENST00000530657 1135 ntBASIC16.29■□□□□ 0.2
APH1BQ8WW43 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 MIR3180-5-201ENST00000583743 153 ntBASIC16.29■□□□□ 0.2
APH1BQ8WW43 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 AC124016.1-201ENST00000609552 612 ntBASIC16.29■□□□□ 0.2
APH1BQ8WW43 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
APH1BQ8WW43 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1BQ8WW43 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms