Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL513190.1-201ENST00000621254 727 ntBASIC21.82■■□□□ 1.08
SNED1Q8TER0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 AC148477.5-201ENST00000625164 1645 ntBASIC21.82■■□□□ 1.08
SNED1Q8TER0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNED1Q8TER0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.81■■□□□ 1.08
SNED1Q8TER0 IGLL3P-201ENST00000412472 434 ntBASIC21.81■■□□□ 1.08
SNED1Q8TER0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.81■■□□□ 1.08
SNED1Q8TER0 AL589182.2-201ENST00000619332 1049 ntBASIC21.81■■□□□ 1.08
SNED1Q8TER0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNED1Q8TER0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNED1Q8TER0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SNED1Q8TER0 AC006504.4-201ENST00000592118 1568 ntBASIC21.81■■□□□ 1.08
SNED1Q8TER0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNED1Q8TER0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNED1Q8TER0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNED1Q8TER0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SNED1Q8TER0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 AC005082.1-201ENST00000413042 2259 ntBASIC21.8■■□□□ 1.08
SNED1Q8TER0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNED1Q8TER0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 C20orf181-201ENST00000623918 480 ntBASIC21.8■■□□□ 1.08
SNED1Q8TER0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.8■■□□□ 1.08
SNED1Q8TER0 AL353593.2-201ENST00000602529 1483 ntBASIC21.79■■□□□ 1.08
SNED1Q8TER0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNED1Q8TER0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNED1Q8TER0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNED1Q8TER0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNED1Q8TER0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.79■■□□□ 1.08
SNED1Q8TER0 AC018845.2-201ENST00000568326 409 ntBASIC21.79■■□□□ 1.08
SNED1Q8TER0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNED1Q8TER0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNED1Q8TER0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNED1Q8TER0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNED1Q8TER0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 MKNK2P1-201ENST00000437526 628 ntBASIC21.78■■□□□ 1.08
SNED1Q8TER0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNED1Q8TER0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.78■■□□□ 1.08
SNED1Q8TER0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNED1Q8TER0 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.77■■□□□ 1.08
SNED1Q8TER0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms