Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HLA-F-220ENST00000434407 884 ntBASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 AC116407.4-201ENST00000623319 1061 ntBASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 LINC00167-201ENST00000530583 1419 ntBASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 UPK3BP1-201ENST00000428678 509 ntBASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMARCC2Q8TAQ2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 AC012317.2-201ENST00000623305 2251 ntBASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMARCC2Q8TAQ2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCC2Q8TAQ2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms