Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 BX005266.1-201ENST00000473402 457 ntBASIC13.98□□□□□ -0.17
LINC01006Q8NI28 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 AL022326.1-202ENST00000641533 845 ntBASIC13.98□□□□□ -0.17
LINC01006Q8NI28 SLC25A24-204ENST00000569674 2357 ntBASIC13.98□□□□□ -0.17
LINC01006Q8NI28 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01006Q8NI28 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 PMPCAP1-201ENST00000508114 1576 ntBASIC13.97□□□□□ -0.17
LINC01006Q8NI28 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 UPF3AP3-201ENST00000420996 769 ntBASIC13.97□□□□□ -0.17
LINC01006Q8NI28 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AC096633.1-201ENST00000422446 749 ntBASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AC122714.2-201ENST00000502787 707 ntBASIC13.97□□□□□ -0.17
LINC01006Q8NI28 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AL691403.2-201ENST00000618460 490 ntBASIC13.97□□□□□ -0.17
LINC01006Q8NI28 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01006Q8NI28 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.96□□□□□ -0.17
LINC01006Q8NI28 AC040169.1-201ENST00000565382 521 ntBASIC13.96□□□□□ -0.17
LINC01006Q8NI28 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC01006Q8NI28 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01006Q8NI28 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01006Q8NI28 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LINC01006Q8NI28 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 RNA5SP416-201ENST00000516838 111 ntBASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms