Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PRORSD1P-201ENST00000295112 541 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 ABHD17AP1-201ENST00000358206 933 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 RPS2P55-201ENST00000397318 883 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 AL023284.2-201ENST00000405850 579 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 MCCD1P1-208ENST00000445732 328 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 AC107956.1-201ENST00000494359 873 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 SLC25A1P4-201ENST00000567977 778 ntBASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
DNAAF1Q8NEP3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 AC233702.5-201ENST00000584107 538 ntBASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.89■□□□□ 0.13
DNAAF1Q8NEP3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AC034236.2-201ENST00000606662 1610 ntBASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 GCSHP5-201ENST00000443090 522 ntBASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AC097488.1-201ENST00000507834 756 ntBASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
DNAAF1Q8NEP3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms