Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 KRT8P11-201ENST00000409686 1436 ntBASIC17.55■□□□□ 0.4
HIPK4Q8NE63 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 AL023806.1-201ENST00000603994 1649 ntBASIC17.54■□□□□ 0.4
HIPK4Q8NE63 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 HLA-L-209ENST00000420110 1011 ntBASIC17.54■□□□□ 0.4
HIPK4Q8NE63 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 PRSS44-201ENST00000515154 1146 ntBASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 AC131212.4-201ENST00000623606 975 ntBASIC17.54■□□□□ 0.4
HIPK4Q8NE63 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.54■□□□□ 0.4
HIPK4Q8NE63 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.54■□□□□ 0.4
HIPK4Q8NE63 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 KRT8P32-201ENST00000512863 1461 ntBASIC17.53■□□□□ 0.4
HIPK4Q8NE63 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.53■□□□□ 0.4
HIPK4Q8NE63 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 AL118508.1-201ENST00000613502 2345 ntBASIC17.52■□□□□ 0.4
HIPK4Q8NE63 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.52■□□□□ 0.4
HIPK4Q8NE63 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms