Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 AC034232.1-201ENST00000506026 1064 ntBASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 SPDYE13P-201ENST00000445314 798 ntBASIC17■□□□□ 0.31
SIMC1Q8NDZ2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AL136038.4-201ENST00000603606 1261 ntBASIC17■□□□□ 0.31
SIMC1Q8NDZ2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SIMC1Q8NDZ2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 FAM8A6P-201ENST00000407496 1135 ntBASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 VENTXP5-201ENST00000523979 775 ntBASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 AC009065.1-201ENST00000564055 1225 ntBASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIMC1Q8NDZ2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIMC1Q8NDZ2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms