Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 NSUN5P1-202ENST00000421140 1535 ntBASIC18.4■□□□□ 0.54
KDM1BQ8NB78 NSUN5P2-203ENST00000457352 1529 ntBASIC18.4■□□□□ 0.54
KDM1BQ8NB78 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 FOSL1P1-201ENST00000511041 816 ntBASIC18.4■□□□□ 0.54
KDM1BQ8NB78 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 LINC01126-201ENST00000623515 1646 ntBASIC18.4■□□□□ 0.54
KDM1BQ8NB78 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM1BQ8NB78 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KDM1BQ8NB78 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 KRT16P4-201ENST00000453883 522 ntBASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AC068472.1-201ENST00000474589 881 ntBASIC18.39■□□□□ 0.53
KDM1BQ8NB78 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AP005901.3-202ENST00000581653 237 ntBASIC18.39■□□□□ 0.53
KDM1BQ8NB78 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 LINC00167-201ENST00000530583 1419 ntBASIC18.39■□□□□ 0.53
KDM1BQ8NB78 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM1BQ8NB78 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 KRT18P65-201ENST00000439811 1286 ntBASIC18.38■□□□□ 0.53
KDM1BQ8NB78 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 UNC93B7-201ENST00000509439 705 ntBASIC18.38■□□□□ 0.53
KDM1BQ8NB78 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 AC099336.1-202ENST00000602961 463 ntBASIC18.38■□□□□ 0.53
KDM1BQ8NB78 IFNL4P1-201ENST00000607083 540 ntBASIC18.38■□□□□ 0.53
KDM1BQ8NB78 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KDM1BQ8NB78 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM1BQ8NB78 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms