Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00311Q8N616 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00311Q8N616 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00311Q8N616 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00311Q8N616 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00311Q8N616 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AL645929.1-201ENST00000420084 975 ntBASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 DDX43P3-201ENST00000441064 443 ntBASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC112698.1-201ENST00000510299 916 ntBASIC14.61□□□□□ -0.07
LINC00311Q8N616 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AL049597.2-201ENST00000565575 961 ntBASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AL121956.5-201ENST00000625261 221 ntBASIC14.61□□□□□ -0.07
LINC00311Q8N616 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00311Q8N616 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LINC00311Q8N616 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 Z83836.1-201ENST00000624605 1642 ntBASIC14.6□□□□□ -0.07
LINC00311Q8N616 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 AC134043.2-201ENST00000624206 2238 ntBASIC14.6□□□□□ -0.07
LINC00311Q8N616 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 AC068472.1-201ENST00000474589 881 ntBASIC14.6□□□□□ -0.07
LINC00311Q8N616 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 RNF126P1-202ENST00000569893 925 ntBASIC14.6□□□□□ -0.07
LINC00311Q8N616 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00311Q8N616 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00311Q8N616 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms