Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 AL390719.2-201ENST00000606993 987 ntBASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 AP000550.4-202ENST00000639755 178 ntBASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC82Q8N4S0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC82Q8N4S0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC82Q8N4S0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC82Q8N4S0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC82Q8N4S0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC82Q8N4S0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC113404.2-201ENST00000507884 177 ntBASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC008687.5-201ENST00000593746 558 ntBASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC82Q8N4S0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21■□□□□ 0.95
CCDC82Q8N4S0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC82Q8N4S0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 AC016734.2-201ENST00000624325 1377 ntBASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC82Q8N4S0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms